simba.datasets.atac_chen2019

simba.datasets.atac_chen2019()[source]

simulated scATAC-seq bone marrow data with a noise level of 0.4 and a coverage of 2500 fragments

ref: Chen, H. et al. Assessment of computational methods for the analysis of single-cell ATAC-seq data. Genome Biology 20, 241 (2019).

Returns:

adata – Anndata object

Return type:

AnnData